Release numerous ports to ports@ I've been retired for a few years, and it is unlikely I will be doing any more scientific computing support in the future. I have continued to maintain ~160 ports to the best of my ability, mainly as a favor to the community, but I can no longer justify the time and effort required. I am therefore releasing most of my scientific ports, along with a few others, to ports@. I will continue to maintain ports I am actively using and those for which I am upstream.2414383046
Port details
biology/preseq3.2.0
Predict yield of distinct reads from a genomic library
- Maintainer
- ports@FreeBSD.org
- Packages
- preseq 3.2.0
- Upstream
- up to date
- CPE
- none, CVEs only via VuXML
- WWW
- https://github.com/smithlabcode/preseq
- Links
- cgit · VuXML
Unaddressed (0) · The CVE record lists this version as affected, no VuXML entry names the CVE
None. There is no CVE without a VuXML entry for this version.
VuXML only (0) · listed, port not fixed yet
None.
pkg audit reports nothing for this version.Fixed (0)
No VuXML entries for this package.
Commits (4)
all: drop support for FreeBSD 13, mips and risc64sf Reviewed by: many (*) Differential Revision: https://reviews.freebsd.org/D55624 Differential Revision: https://reviews.freebsd.org/D55642 (merged in from bofh) many (*) acm arrowd brooks cmt dch decke dinoex eduardo fluffy fuz gahr garga jbeich joerg jrm kai kenrap martymac matthew mfechner michaelo mizhka nobutaka pkubaj se tagattie thj Anton Saietskii GenericRikka Gert Doering Jan Bramkamp Oleh Hushchenkov Oleksandr Kryvulia Ralf van der Enden Yamagi desktop kde python tcltk office2a7c056120
preseq: Not for 32-bit platforms Build fails on i386 and bioinformatics generally requires 64 bits1c58b37834
biology/preseq: Predict yield of distinct reads from a genomic library The preseq package is aimed at predicting the yield of distinct reads from a genomic library from an initial sequencing experiment. The estimates can then be used to examine the utility of further sequencing, optimize the sequencing depth, or to screen multiple libraries to avoid low complexity samples.af7a74db00