french/med4.0.0_3

*: Bump PORTREVISIONs for math/mpc update to 1.3.1

Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)

Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.

This commit implements such a proposal and moves one of the WWW: entries
of each pkg-descr file into the respective port's Makefile. A heuristic
attempts to identify the most relevant URL in case there is more than
one WWW: entry in some pkg-descr file. URLs that are not moved into the
Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr
files in order to preserve them.

There are 1256 ports that had no WWW: entries in pkg-descr files. These
ports will not be touched in this commit.

The portlint port has been adjusted to expect a WWW entry in each port
Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as
deprecated.

Approved by:		portmgr (tcberner)

science/hdf5: bump PORTREVISION of consumers

The SO-version increased in the update to 1.12.2 in
a43418b81530f7e897abfbe18dd59f44265a1a0f .

Reported by:	VVD <vvd@unislabs.com>

french: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Andreas Fehlner (fehlner@gmx.de)
  *  Dan Phillips <dan-ports@dp.id.au>
  *  Elvis Chiang <elvis@sslab.cs.ccu.edu.tw>
  *  Frederic Culot <frederic@culot.org>
  *  Thierry Thomas <thierry@pompo.net>
  *  janos.mohacsi@bsd.hu
  *  thierry@pompo.net

With hat:	portmgr

french/med: Change LIB_DEPENDS from hdf5 to hdf5-110

- Bump PORTREVISION for dependency change

french/med: Fix build with HDF5 1.10.8+

- While I'm here, use sed from basd system instead of gesed from ports

Remove # $FreeBSD$ from Makefiles.

Translate pkg-descr into english, thus removing Latin-1 encoding.

PR:		252782
Submitted by:	joerg

Upgrade Code_Aster to 14.4.0-1.

PR:		242655

Bump PORTREVISION for ports depending on the canonical version of GCC as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3 to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330

Related to revision 499061 bump ports with USES=fortran to have them benefit from the improved situation where libgcc_s is only used when absolutely necessary.

Suggested by:	tijl

Bump PORTREVISION for ports depending on the canonical version of GCC defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590

Upgrade science/hdf5-18 to 1.8.21.

Release notes at:
<https://portal.hdfgroup.org/display/HDF5/Software+Changes+from+Release+to+Release+for+HDF5-1.8#SoftwareChangesfromReleasetoReleaseforHDF5-1.8-Release1.8.21ofMay2018versusRelease1.8.20>

PR:		233071
Submitted by:	wenheping2000 (at) hotmail.com (Original maintainer)

Upgrade Code_Aster to 13.6.0-1.

Bump PORTREVISION for ports depending on the canonical version of GCC in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which has now moved from GCC 6 to GCC 7 by default.

This includes ports
 - featuring USE_GCC=yes or USE_GCC=any,
 - featuring USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and those
 - with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
   c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.

PR:		222542

- Switch to new test framework - Switch to options helpers

Approved by:	portmgr blanket

Bump PORTREVISIONs of all users of math/mpc that we just updated to version 1.1.0 (via revision 464079).

Fix build on head.

Reported by:	packages cluster

Upgrade HDF5 to 1.8.20.

Release notes at
https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8/hdf5-1.8.20/src/hdf5-1.8.20-RELEASE.txt

Upgrade - endly! - to Code_Aster 13.4.0-3.

Notes:

- I have (not yet) succeeded to enable MFront in this version;

- it uses math/mumps-edf, repocopied from math/mumps;

- cad/scotch is now taken out of the aster tarball;

- french/eficas is no more used: to be replaced by "aster-study" in Salome_Meca
	(the port cad/salome should be resurrected!)

Bump PORTREVISION for ports depending on the canonical version of GCC (via Mk/bsd.default-versions.mk and lang/gcc) which has moved from GCC 5.4 to GCC 6.4 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang,
   c++14-lang, c++0x, c11, or gcc-c++11-lib.

PR:		219275

Upgrade science/hdf5-18 to 1.8.19.

Changelog at
<https://support.hdfgroup.org/HDF5/doc1.8/ADGuide/Changes.html#1819>.

Bump PORTREVISIONs for ports depending on the canonical version of GCC and lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some circumstances such as versions of FreeBSD or platforms).

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using using Mk/bsd.octave.mk which in turn has USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang,
   c++11-lang, c++0x, c11, or gcc-c++11-lib.

PR:		216707

Bump PORTREVISIONS for ports depending on the canonical version of GCC and lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some circumstances such as versions of FreeBSD or platforms), part II.

The first part covered  ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.

This adds ports with USES=fortran and ports using Mk/bsd.octave.mk
which in turn has USES=fortran.

PR:		214965
Reported by:	thierry

Upgrade Code_Aster to 12.0.6-4.

This brings french/eficas to 2016.0.1,
	cad/astk-serveur and astk-client to 1.13.8.2,
	french/med to 3.2.0 (built against hdf5-18),
	bump PORTREVSION to math/metis-edf and fix soname,
	and french/homard to 11.7-1.

Chase the latest hdf5 upgrade and unbreak.

- Update to 1.10.0 - Add LICENSE_FILE - Remove outdated PORTSCOUT - Re-enable SZIP option by default: it was changed unintentionally in r398300

Changes:	https://www.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.0/src/hdf5-1.10.0-RELEASE.txt
		https://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html

Remove ${PORTSDIR}/ from dependencies, categories d, e, f, and g.

With hat:	portmgr
Sponsored by:	Absolight

- Update to 1.8.15 - Bump PORTREVISION for science/hdf5 shlib change

Changes:	http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.8.15-RELEASE.txt
		http://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html

Update Code_Aster to 11.7.0-1, with its different tools.

- Update to 1.8.14 - Update MASTER_SITES - Use INSTALL_TARGET=install-strip instead of MAKE_ENV=INSTALL_STRIP_FLAG=${STRIP} - Bump PORTREVISION for science/hdf5 shlib change

Changes:	http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.8.14-RELEASE.txt
		http://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html

Cleanup plist

Update the default version of GCC in the Ports Collection from GCC 4.7.4 to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)

- Drop .la files, no dependees require them

Approved by:	portmgr blanket

- Update to 1.8.12 (from science/hdf5-18) - Add LICENSE - Convert to new LIB_DEPENDS format - Convert to new options helper - Use NOT_FOR_ARCHS - Strip shared library - Remove deprecated PTHREAD_* - Use MAKE_CMD - Bump PORTREVISION for science/hdf5 shlib change [1]

Changes:	http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.8.12-RELEASE.txt
		http://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html
Approved by:	portmgr (bapt) [1]

When linking a library libA with a library libB using libtool, if libB.la exists, libtool will add all libraries libB.la refers to (dependency_libs field) to the linker command line and store them in the dependency_libs field of libA.la.  So everything that subsequently links with libA will also link to these extra libraries.  This causes too much overlinking.

This commit modifies Mk/Uses/libtool.mk so it empties the dependency_libs
field in .la libraries during staging.  However, because .la libraries have
very limited use when dependency_libs is empty it makes sense to completely
remove them during staging.

So with this commit USES=libtool is modified to remove .la libraries and a
new form (USES=libtool:keepla) is introduced in case they need to be kept
(dependency_libs is still emptied).

PORTREVISION is bumped on all ports with USES=libtool that install .la
libraries.  Most ports are also changed to add :keepla because .la
libraries have to be kept around as long as there are dependent ports with
.la libraries that refer to them in their dependency_libs field.  In most
cases :keepla can be removed again as soon as all dependent ports that
install .la libraries have some form of USES=libtool added to their
Makefile.

PR:		ports/188759
Exp-run:	bdrewery
Approved by:	portmgr (bdrewery)

Upgrade Code_Aster to 11.5.0-4.

N.B.: french/aster is still marked BROKEN, but this allows to unbreak
other ports sharing the same dependencies.

Patch for french/med provided by tijl.

Update the default version of GCC used in the Ports Collection from GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)

- Convert to USES=tk - Convert to new LIB_DEPENDS format - STAGE-clean

Convert all USE_FORTRAN=yes to "USES=fortran, USE_GCC=yes".  In most cases USE_GCC=yes has been omitted though.

Remove USE_FORTRAN handling from bsd.port.mk and bsd.gcc.mk.

Minor cleanups in some ports like USE_GMAKE, NOPORTDOCS,...

Exp-run:	bdrewery
Approved by:	portmgr (bdrewery)

Update to libmpc version 1.0.1 which brings the following fixes:

- Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
 - 0^0, which returned (NaN,NaN) previously, now returns (1,+0).
 - Removed compatibility with K&R compilers, which was untestable due
   to lack of such compilers.
 - New functions
   . mpc_log10
   . mpc_mul_2si, mpc_div_2si
 - Speed-ups
   . mpc_fma
 - Bug fixes
   . mpc_div and mpc_norm now return a value indicating the effective
     rounding direction, as the other functions.
   . mpc_mul, mpc_sqr and mpc_norm now return correct results even if
     there are over- or underflows during the computation.
   . mpc_asin, mpc_proj, mpc_sqr: Wrong result when input variable has
     infinite part and equals output variable is corrected.
   . mpc_fr_sub: Wrong return value for imaginary part is corrected.

Convert to the new LIB_DEPENDS standard and remove hard-coded
.so versions from a couple of dependent ports.

Bump PORTREVISIONS of all dependent ports.

PR:		183141
Approved by:	portmgr (bdrewery)

Add NO_STAGE all over the place in preparation for the staging support (cat: french)

Fix plist.

Reported by:	miwi

Upgrade to 3.0.6.

Upgrade Code_Aster to 10.6.0-3.

- Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS) - Fix all ports that add {CPP,LD}FLAGS to *_ENV to modify flags instead

PR:		157936
Submitted by:	myself
Exp-runs by:	pav
Approved by:	pav

- Bump PORTREVISION for science/hdf5-18 shlib change

Chase the upgrade of science/cgnslib to 2.5-5; this implies to switch some dependencies from science/hdf5 to science/hdf5-18.

As a side note: I think that all ports depending on science/hdf5
could be switched to science/hdf5-18, by defining H5_USE_16_API
when necessary, and then science/hdf5 could be deprecated.

PR:		ports/154736

Sync to new bsd.autotools.mk