science/checkmol0.5_18

science/checkmol: enable on powerpc64*

*/*: Bump PORTREVISION. lang/fpc was updated to 3.2.3 (20251007)

*/*: Bump PORTREVISION. editors/lazarus was updated to 3.8.0

*/*: Pass to fpc based ports control of ONLY_FOR_ARCHS

- science/checkmol: Add aarch64 like supported platform
- science/mol2ps: Add aarch64 like supported platform
- science/mol2ps: Fix fetch updating it to 0.4c

*/*: Bump PORTREVISION. lang/fpc was updated to 3.2.3

Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)

Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.

This commit implements such a proposal and moves one of the WWW: entries
of each pkg-descr file into the respective port's Makefile. A heuristic
attempts to identify the most relevant URL in case there is more than
one WWW: entry in some pkg-descr file. URLs that are not moved into the
Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr
files in order to preserve them.

There are 1256 ports that had no WWW: entries in pkg-descr files. These
ports will not be touched in this commit.

The portlint port has been adjusted to expect a WWW entry in each port
Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as
deprecated.

Approved by:		portmgr (tcberner)

science: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Andreas Fehlner <fehlner@gmx.de>
  *  Brad Huntting <huntting@glarp.com>
  *  Chao Shin <quakelee@cn.FreeBSD.org>
  *  Cheng-Lung Sung <clsung@FreeBSD.org>
  *  Chia-Hsing Yu <me@davidyu.org>
  *  Chris Rees <utisoft@gmail.com>
  *  David Naylor <dbn@FreeBSD.org>
  *  Dmitry Sivachenko <demon@FreeBSD.org>
  *  Ed Schouten <ed@FreeBSD.org>
  *  Eric Freeman <freebsdports@chillibear.com>
  *  Erik B Knudsen
  *  Fernan Aguero <fernan@iib.unsam.edu.ar>
  *  Frederic Culot <frederic@culot.org>
  *  Gea-Suan Lin <gslin@gslin.org>
  *  Glenn Johnson
  *  Greg Lewis <glewis@FreeBSD.org>
  *  Igor Serikov <iserikov@acm.org>
  *  Johannes Dieterich <dieterich@ogolem.org>
  *  Johannes Dieterich <jmd@FreeBSD.org>
  *  Johannes M Dieterich <jmd@FreeBSD.org>
  *  Johannes Meixner <johannes@perceivon.net>
  *  Ju Pengfei <jupengfei@gmail.com>
  *  Kay Lehmann <kay_lehmann@web.de>
  *  Klaus Aehlig <aehlig@linta.de>
  *  Kurt Kanzenbach <kurt@kmk-computers.de>
  *  Leland Wang <llwang@infor.org>
  *  Li-Lun Wang <llwang@infor.org>
  *  Markus Brueffer <markus@FreeBSD.org>
  *  NAKATA Maho <maho@FreeBSD.org>
  *  NAKATA, Maho <maho@FreeBSD.org>
  *  Nakata Maho <chat95@mbox.kyoto-inet.or.jp>
  *  Nakata Maho <maho@FreeBSD.org>
  *  Pav Lucistnik <pav@FreeBSD.org>
  *  Pav Lucistnik <pav@oook.cz>
  *  Pedro F. Giffuni
  *  Pedro F. Giffuni <giffunip@tutopia.com>
  *  Pedro Giffuni
  *  Pedro Giffuni <giffunip@asme.org>
  *  Po-Chuan Hsieh <sunpoet@FreeBSD.org>
  *  Rong-En Fan <rafan@FreeBSD.org>
  *  Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp>
  *  Seamus Venasse <svenasse@polaris.ca>
  *  Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp>
  *  Shin-ya MURAKAMI <murashin@gfd-dennou.org>
  *  Shin-ya Murakami <murashin@gfd-dennou.org>
  *  Stas Timokhin <devel@stasyan.com>
  *  Stephen Montgomery-Smith <stephen@math.missouri.edu>
  *  Steve Wills <steve@mouf.net
  *  Steve Wills <steve@mouf.net>
  *  Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org>
  *  Sunpoet Po-Chuan Hsieh <sunpoet@sunpoet.net>
  *  TAKATSU Tomonari <tota@FreeBSD.org>
  *  TAOKA Fumiyoshi
  *  Thierry Thomas <thierry@pompo.net>
  *  Tim Cas <ports@stdrand.com>
  *  Uffe Jakobsen <uffe@uffe.org>
  *  Veniamin Gvozdikov <vg@FreeBSD.org>
  *  Vsevolod Stakhov <vsevolod@highsecure.ru>
  *  Wen Heping <wen@FreeBSD.org>
  *  Wen Heping <wenheping@gmail.com>
  *  Wen heping <wenheping@gmail.com>
  *  Ying-Chieh Liao <ijliao@FreeBSD.org>
  *  Yuri Victorovich <yuri@rawbw.com>
  *  anholt@FreeBSD.org
  *  bacon@smithers.neuro.mcw.edu
  *  batman <batman@udel.edu>
  *  db
  *  gurkan@phys.ethz.ch
  *  ijliao
  *  jbacon
  *  maintainer.freebsd@xpoundit.com
  *  mi
  *  rafan@infor.org
  *  shurd@FreeBSD.org
  *  thierry@pompo.net
  *  will

With hat:	portmgr

lang/fpc: Fix build issues building some fpc based apps

- Add missing parameter to getdirentries syscall function
- Re-build i386 and amd64 bootstrap
- Revert fpc-i386 (FPC_USE_LIBC) build to syscall build
- Bump PORTREVISION in all ports dependant of freepascal compiler

*/*: Bump PORTREVISION

- lang/fpc was update to new bootstrap

lang/fpc: Fix build issue on lazarus i386 and amd64

- Bump PORTREVISION
- Disable some default OPTIONS
Obtained from:	https://forum.lazarus.freepascal.org/index.php/topic,57752.msg429737.html#msg429737

games/hedgewars: lang/nbc: science/checkmol: science/mol2ps: bump PORTREVISION

* lang/fpc was updated to 3.2.2

Remove # $FreeBSD$ from Makefiles.

- lang/fpc revert way like linker is taken by fpc compiler - lang/fpc add binutils to RUN_DEPENDS - editors/lazarus add binutils to RUN_DEPENDS - editors/lazarus add gmake to RUN_DEPENDS - editors/lazarus install fpc units like RUN_DEPENDS too - Bump PORTREVISiON of fpc/lazarus ports

PR:		251712
Reported by:	amdmi3

- Bump PORTREVISION. fpc was updated to 3.2.0

- Remove compat < 11 dependencies from bootstrap and compiler. It could fix problems   when GENERIC kernel is not used. - Rebuild bootstrap (ppcx64 and ppc386) with new changes - Bump PORTREVISION

PR:		239135
Reported by:	fbsdbugs4  at  sentry.org

- Change LDPATH to FPC_LDPATH into lang/fpc/Makefile. It can be changed from   /etc/make.conf - Add FPC_LDPATH to freepascal compiler. By default it is defined to   %%LOCALBASE%%/bin/ld.bfd but it can be changed setting FPC_LDPATH environment   variable - Remove compatX dependencies from bootstrap and compiler. It could fix problems   when GENERIC kernel is not used [1] - Rebuild bootstrap (ppcx64

PR:		239135
Submitted by:	fbsdbugs4 __at__ sentry.org

Mark a few ports BROKEN (unfetchable)

- Rebuild bootstrap (ppcx64 and ppc386) with ld patches - Fix build on 12-STABLE and CURRENT (amd64 and i386) - Bump PORTREVISION for all ports that depends of lang/fpc - Add USE_BINUTILS to fpc and lazarus based ports - Add binutils dependency to Uses/fpc.mk and Uses/lazarus.mk

PR:		240293 239934 233413 214864
Exp-run by:	antoine

- Add new fpc bootstrap (i386 and x86_64). It could need less COMPATX   dependencies in kernel - Add patch file to solve some linking problem - Remove LD_UNSAFE. Now it can be defined via LDPATH (/usr/bin/ld.bfd by   default). fpc is not working with lld. We will use binutils-ports when   ld.bfd is moved from base if lld not working on future version   of fpc - Bump PORTREVISION

- Add LLD_UNSAFE

PR:		214864

- Migrate Mk/bsd.fpc.mk to Mk/Uses/fpc.mk - Convert all fpc-based ports to USES=fpc

PR:             227210
Reviewed by:    portmgr
Approved by:    portmgr
Exp-run by:     antoine
Differential Revision:  https://reviews.freebsd.org/D14617

- Bump PORTREVISION. lang/fpc was updated to 3.0.4

- Bump PORTREVISION. Freepascal was updated - Take maintainership

Convert LICENSE= "GPLxx # or later" to "GPLxx+"

Approved by:	portmgr blanket

Fix ports that confused the meaning of WRKDIR and WRKSRC.

PR:		204056
Submitted by:	mat
Reviewed by:	bapt
Sponsored by:	Absolight
Differential Revision:	https://reviews.freebsd.org/D2735

- editors/lazarus update to 1.4.2 - Add USE_FPC_RUN to bsd.fpc.mk. It add fpc units like run dependencies. Otherwise   fpc units only are added like build dependencies (less dependencies registered   when they are installed with pkg). - Remove GTK1 obsolete dependencies - Bump all ports with dependencies of fpc-* units - Bump all ports with dependencies of lazarus ports - Clean up

Stagify.

- Bump PORTREVISION. Freepascal compiler was updated to 2.6.4

Add NO_STAGE all over the place in preparation for the staging support (cat: science)

- worked with upstream to roll versioned source distfile - no difference in previous distfile (ie. checksum) - remove unneeded dist_subdir directive

- update to 0.5

Submitted by:	pointhat (erwin@)

- update to 0.4e - unbreak as distfile is unversioned   - future mismatches should be investigated as potential software updates

Approved by:	portmgr (erwin)

- Mark BROKEN  checksum mismatch

Reported by:	pointyhat
Approved by:	portmgr

- Update to 0.4d

PR:		176547
Submitted by:	ports fury

- Reassign to the heap at maintainer's request

- Bump PORTREVISION (freepascal ports were updated)

- remove MD5

- Bump PORTREVISION. lang/fpc has been updated to 2.4.4

- Welcome to fpc 2.4.2 - Bump PORTREVISIOON

- Bump PORTREVISION. lang/fpc was updated and now it supports amd64

Checkmol is a command-line utility program which reads molecular structure files in different formats and analyzes the input molecule for the presence of various functional groups and structural elements. At present, approx. 200 different functional groups are recognized. This output can be easily placed into a database table, permitting the creation of chemical databases with a functional group s

WWW: http://merian.pch.univie.ac.at/~nhaider/cheminf/cmmm.html

PR:		ports/138670
Feature safe:yes
Submitted by:	Fernan Aguero <fernan at iib.unsam.edu.ar>